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Description : not classified & original description: none
Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00092420 | GRF1, AtGRF1,... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G13960 | GRF5, AtGRF5 | growth-regulating factor 5 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G52910 | GRF4, AtGRF4 | growth-regulating factor 4 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G37740 | GRF2, AtGRF2 | growth-regulating factor 2 | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene21331.t1 | GRF6, AtGRF6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0097.g043820 | GRF1, AtGRF1 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12857 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007165001 | GRF2, AtGRF2 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01015095001 | GRF5, AtGRF5 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016762001 | GRF5, AtGRF5 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027535001 | GRF9, AtGRF9 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038629001 | AtGRF7, GRF7 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g45570.1 | GRF3, AtGRF3,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g47140.1 | GRF1, AtGRF1,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g51970.1 | GRF1, AtGRF1,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g02560.1 | GRF2, AtGRF2,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g29980.1 | GRF2, AtGRF2,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02430 | GRF5, AtGRF5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05270 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000754 | GRF2, AtGRF2 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0161.g023900 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g091540.3.1 | GRF9, AtGRF9,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g082430.1.1 | AtGRF7, GRF7,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g005430.3.1 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g075950.3.1 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g083230.3.1 | AtGRF8, GRF8,... | component GRF of GRF-GIF transcriptional complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g083510.2.1 | GRF3, AtGRF3,... | component GRF of GRF-GIF transcriptional complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g096070.2.1 | GRF5, AtGRF5,... | component GRF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06684 | GRF5, AtGRF5 | component *(GRF) of GRF-GIF transcriptional complex &... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |