1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g058263

Adi_g058263


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00095700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g088779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.03 OrthoFinder output from all 47 species
Dcu_g11066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
Len_g20730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.03 OrthoFinder output from all 47 species
Nbi_g07327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.04 OrthoFinder output from all 47 species
Spa_g06353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026685_P001 Zm00001e026685 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 268.0) 0.02 OrthoFinder output from all 47 species
Zm00001e027710_P001 Zm00001e027710 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 653 694
IPR006652 Kelch_1 605 649
IPR006652 Kelch_1 561 601
IPR006652 Kelch_1 511 555
IPR013989 Dev_and_cell_death_domain 32 160
No external refs found!