1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g058115

Adi_g058115


Description : not classified & original description: none


Gene families : OG0003758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003758_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058115
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Adi_g009334 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g013991 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Adi_g020420 No alias not classified & original description: none 0.25 OrthoFinder output from all 47 species
Adi_g023891 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g029080 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g031079 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Adi_g045884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g045918 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g051554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053916 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g054205 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Adi_g060331 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g061933 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g071643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079193 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g085277 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Adi_g087724 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Adi_g098326 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Adi_g105180 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g105691 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Adi_g116458 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g116471 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Adi_g121355 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g121357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g125138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g128497 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g128498 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Aop_g36699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00118.t1 Aspi01Gene00118 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24593.t1 Aspi01Gene24593 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24912.t1 Aspi01Gene24912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42837.t1 Aspi01Gene42837 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60965.t1 Aspi01Gene60965 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g76088 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g26487 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Len_g41564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c19_13850V3.1 Pp3c19_13850 No annotation 0.02 OrthoFinder output from all 47 species
Sam_g37931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 319 462
IPR041577 RT_RNaseH_2 528 629
IPR041588 Integrase_H2C2 784 839
No external refs found!