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Description : cofactor of plastid-encoded RNA polymerase *(TAC17) & original description: none
Gene families : OG0001348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001348_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00183310 | PTAC17,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01393 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11258 | PTAC17 | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33722 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75832 | PTAC17 | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre14.g630871 | PTAC17 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g07139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017471001 | PTAC17 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g55630.1 | PTAC17, LOC_Os02g55630 | TAC17 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426227g0010 | PTAC17 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g05690.1 | No alias | TAC17 cofactor of plastid-encoded RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12994 | PTAC17 | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g20097 | PTAC17 | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008816 | No alias | not classified & original description: CDS=1575-2087 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0057.g014804 | PTAC17 | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0495.g027428 | PTAC17 | cofactor of plastid-encoded RNA polymerase *(TAC17) &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo405512 | No alias | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005985 | sucrose metabolic process | IEP | HCCA |
| BP | GO:0005986 | sucrose biosynthetic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0019203 | carbohydrate phosphatase activity | IEP | HCCA |
| CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0050307 | sucrose-phosphate phosphatase activity | IEP | HCCA |
| MF | GO:0050308 | sugar-phosphatase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
| CC | GO:1905348 | endonuclease complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |