1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g057512

Adi_g057512 (APUM2, PUM2)


Aliases : APUM2, PUM2

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057512

Target Alias Description ECC score Gene Family Method Actions
Als_g37314 APUM6, PUM6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s2326.g110592 PUM1, APUM1 not classified & original description: CDS=3742-4032 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001065.15 PUM5, APUM5 No description available 0.01 OrthoFinder output from all 47 species
MA_23070g0010 PUM1, APUM1 Pumilio homolog 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g11828 PUM1, APUM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11332 PUM1, APUM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 116 150
IPR001313 Pumilio_RNA-bd_rpt 188 221
IPR001313 Pumilio_RNA-bd_rpt 260 295
IPR001313 Pumilio_RNA-bd_rpt 152 186
IPR001313 Pumilio_RNA-bd_rpt 333 366
IPR001313 Pumilio_RNA-bd_rpt 298 330
IPR001313 Pumilio_RNA-bd_rpt 224 255
IPR001313 Pumilio_RNA-bd_rpt 379 408
IPR012940 NABP 15 111
No external refs found!