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  5. Adi_g057497

Adi_g057497 (LZF1, STH3, DBB3)


Aliases : LZF1, STH3, DBB3

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057497

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Ala_g36004 STO not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06573 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0133.g049310 LZF1, STH3, DBB3 BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z197300.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G000800.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ehy_g26676 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g10580.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20549 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31497 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39847 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo102790 ATCOL4, COL4 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Smo271535 STO RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 150 190
No external refs found!