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Aliases : LZF1, STH3, DBB3
Description : BBX class-IV transcription factor & original description: none
Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Adi_g057496 | |
| Cluster | HCCA: Cluster_274 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00099p00149290 | LZF1, STH3,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G31380 | STH | salt tolerance homologue | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20960 | STO | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62651.t2 | Aspi01Gene62651 | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02352 | STO | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g41560.2 | STO, LOC_Os04g41560 | transcription factor (BBX-DBB) | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g05940.1 | No alias | transcription factor (BBX-DBB) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g21663 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g00412 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10682 | STO | BBX class-IV transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12390 | STO | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19076 | No alias | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022915_P001 | STO, Zm00001e022915 | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000315 | Znf_B-box | 57 | 99 |
| No external refs found! |