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  5. Adi_g056998

Adi_g056998


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056998

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266060 SAMDC,... Polyamine... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00109640 SAMDC,... Polyamine... 0.02 OrthoFinder output from all 47 species
Aev_g11762 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04281 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35112 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38176 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18164 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61164.t1 Aspi01Gene61164 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03355 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G058600.1 SAMDC, Ceric.07G058600 EC_4.1 carbon-carbon lyase & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g11559 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22759 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01538 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os09g37120.1 LOC_Os09g37120 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Lfl_g25624 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429775g0030 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_10434945g0020 SAMDC S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Nbi_g10143 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07560 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18524 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22755 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39268 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021441 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=1-1338 0.02 OrthoFinder output from all 47 species
Sam_g40367 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc02g089610.2.1 Solyc02g089610 S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Solyc03g098310.1.1 Solyc03g098310 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g17277 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37126 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05489 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08798 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 20 349
IPR022644 De-COase2_N 404 579
No external refs found!