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  5. Adi_g056676

Adi_g056676


Description : phosphoinositide transfer protein *(SFH) & original description: none


Gene families : OG0000242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056676

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00081360 evm_27.TU.AmTr_v1... Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Adi_g033832 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g48990.1 LOC_Os02g48990 Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Lfl_g05698 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Sam_g14625 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g109870.3.1 Solyc01g109870 Phosphatidylinositol/phosphatidylcholine transfer... 0.04 OrthoFinder output from all 47 species
Spa_g53460 ATSFH12, SFH12 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e014650_P002 SFH3, ATSFH3,... Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 3 84
No external refs found!