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  5. Adi_g056501

Adi_g056501 (GR-RBP3)


Aliases : GR-RBP3

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056501
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AT5G06210 No alias RNA binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Als_g37833 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32051 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51438.t1 GRP2, ATGRP2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10484 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g43600.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Nbi_g02220 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_1830V3.1 ATRZ-1A, Pp3c12_1830 RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.01 OrthoFinder output from all 47 species
Smo406315 GR-RBP4, GRP4 Glycine-rich RNA-binding protein 2, mitochondrial... 0.02 OrthoFinder output from all 47 species
Tin_g07967 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 38 108
No external refs found!