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  5. Adi_g056023

Adi_g056023


Description : histone demethylase *(JMJD6) & original description: none


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056023

Target Alias Description ECC score Gene Family Method Actions
Ceric.32G009400.1 Ceric.32G009400 histone demethylase *(JMJD6) & original description:... 0.03 OrthoFinder output from all 47 species
Mp1g25060.1 No alias histone demethylase (JMJD6). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Solyc04g074490.3.1 Solyc04g074490 transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Zm00001e001883_P001 Zm00001e001883 transcription factor (JUMONJI) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 84 124
IPR041667 Cupin_8 201 419
No external refs found!