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  5. Adi_g055515

Adi_g055515


Description : not classified & original description: none


Gene families : OG0001970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g055515

Target Alias Description ECC score Gene Family Method Actions
Ceric.28G067800.1 Ceric.28G067800 component *(RBM26) of PAXT nucleoplasmic activation... 0.05 OrthoFinder output from all 47 species
Dde_g23614 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Mp5g00230.1 No alias Zinc finger CCCH domain-containing protein 41... 0.02 OrthoFinder output from all 47 species
Ore_g15250 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.02 OrthoFinder output from all 47 species
Ore_g27253 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.02 OrthoFinder output from all 47 species
Sam_g29691 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.02 OrthoFinder output from all 47 species
Solyc02g086510.4.1 Solyc02g086510 Zinc finger CCCH domain-containing protein 41... 0.03 OrthoFinder output from all 47 species
Solyc12g035250.3.1 Solyc12g035250 Zinc finger CCCH domain-containing protein 41... 0.03 OrthoFinder output from all 47 species
Zm00001e008334_P001 Zm00001e008334 Zinc finger CCCH domain-containing protein 27 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 68 109
No external refs found!