Adi_g055304

Description : CORVET-specific component *(VPS3) of HOPS/CORVET membrane tethering complexes & original description: none

Gene families : OG0006416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006416_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g055304

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00129430	evm_27.TU.AmTr_v1...	Vesicle trafficking.target membrane...	0.02	OrthoFinder output from all 47 species
Aob_g10925	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 47 species
Aspi01Gene42562.t1	Aspi01Gene42562	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z286500.1	Ceric.1Z286500	not classified & original description: pacid=50637237...	0.03	OrthoFinder output from all 47 species
Ehy_g09262	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.03	OrthoFinder output from all 47 species
GSVIVT01013627001	No alias	Vesicle trafficking.target membrane...	0.04	OrthoFinder output from all 47 species
Len_g08857	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 47 species
Lfl_g10679	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 47 species
MA_1271g0010	No alias	CORVET-specific component VPS3 of HOPS/CORVET membrane...	0.04	OrthoFinder output from all 47 species
Sam_g16295	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 47 species
Solyc05g015210.4.1	Solyc05g015210	CORVET-specific component VPS3 of HOPS/CORVET membrane...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019452	VPS39/TGF_beta_rcpt-assoc_1	627	699
IPR001180	CNH_dom	252	418
IPR019453	VPS39/TGF_beta_rcpt-assoc_2	963	1070
IPR000547	Clathrin_H-chain/VPS_repeat	871	950

External Links

No external refs found!