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  5. Adi_g055180

Adi_g055180 (AtABI2, ABI2)


Aliases : AtABI2, ABI2

Description : clade A phosphatase & original description: none


Gene families : OG0000226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000226_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g055180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00129440 AtABI1, ABI1,... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
AT5G51760 AHG1 Protein phosphatase 2C family protein 0.02 OrthoFinder output from all 47 species
Als_g11366 AtABI1, ABI1 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35300 AtABI1, ABI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49089.t1 AtABI1, ABI1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14464 HAB1 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g141250 AtABI2, ABI2 Protein phosphatase 2C 16 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre03.g211073 PP2CA, ATPP2CA, AHG3 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
GSVIVT01016816001 HAB1 Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
LOC_Os01g40094.1 HAB2, LOC_Os01g40094 regulatory phosphatase component of cytoplasm-localized... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49730.1 HAI3, LOC_Os05g49730 clade A phosphatase 0.02 OrthoFinder output from all 47 species
Len_g15263 HAB2 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44503 HAI1 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30250 PP2CA, ATPP2CA, AHG3 clade A phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012130 HAB1 clade A phosphatase & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Sam_g19584 No alias clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g062650.2.1 HAB1, Solyc08g062650 regulatory phosphatase component of cytoplasm-localized... 0.03 OrthoFinder output from all 47 species
Spa_g51246 HAI3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027771_P002 HAB2, Zm00001e027771 regulatory phosphatase component of cytoplasm-localized... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 245 416
IPR001932 PPM-type_phosphatase-like_dom 42 133
No external refs found!