Adi_g053627


Description : not classified & original description: none


Gene families : OG0004660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004660_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g053627

Target Alias Description ECC score Gene Family Method Actions
AT1G13160 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g09894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.36 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre06.g277050 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01000585001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_20290 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53770.1 LOC_Os04g53770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g099890.2.1 Solyc12g099890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006853_P001 Zm00001e006853 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007949 SDA1_C 429 771
IPR012977 SDA1_N 71 122
No external refs found!