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  5. Adi_g053353

Adi_g053353


Description : not classified & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g053353
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00191170 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00148030 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
AT1G57590 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
AT3G62060 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
AT5G26670 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT5G45280 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
Ala_g20025 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28037 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07334 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08706 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26700 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 OrthoFinder output from all 47 species
Gb_06563 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Gb_28230 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os01g66840.1 LOC_Os01g66840 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os07g44070.1 LOC_Os07g44070 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_3303g0010 No alias pectin acetylesterase 0.05 OrthoFinder output from all 47 species
MA_52077g0010 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
MA_6644500g0010 No alias Pectin acetylesterase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g13760.1 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Mp3g22170.1 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Nbi_g12003 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38138 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29548 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39303 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Solyc03g078260.3.1 Solyc03g078260 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc08g005790.3.1 Solyc08g005790 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Solyc08g075030.3.1 Solyc08g075030 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc12g005320.3.1 Solyc12g005320 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc12g019440.3.1 Solyc12g019440 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Spa_g12342 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21771 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 2 143
No external refs found!