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  5. Adi_g052544

Adi_g052544


Description : deubiquitinase *(OTU6-12) & original description: none


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g052544

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00250460 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01017597001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Pir_g32329 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025398 No alias deubiquitinase *(OTU6-12) & original description: CDS=147-893 0.02 OrthoFinder output from all 47 species
Sam_g23784 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52629 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013725_P001 Zm00001e013725 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species
Zm00001e040804_P001 Zm00001e040804 C85 Otubain cysteine protease 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 97 194
No external refs found!