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  5. Adi_g045430

Adi_g045430 (ATCPL3, CPL3)


Aliases : ATCPL3, CPL3

Description : not classified & original description: none


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g045430

Target Alias Description ECC score Gene Family Method Actions
AT2G33540 ATCPL3, CPL3 C-terminal domain phosphatase-like 3 0.02 OrthoFinder output from all 47 species
Adi_g010425 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000478.38 CPL4 Protein modification.dephosphorylation.aspartate-based... 0.01 OrthoFinder output from all 47 species
Dcu_g09003 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g32430.1 CPL4, LOC_Os05g32430 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
LOC_Os11g31890.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
Len_g14172 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19075 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!