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  5. Adi_g044986

Adi_g044986


Description : R-loop reader protein *(ALBA1/2) & original description: none


Gene families : OG0001187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g044986

Target Alias Description ECC score Gene Family Method Actions
AT1G29250 No alias Alba DNA/RNA-binding protein 0.03 OrthoFinder output from all 47 species
AT2G34160 No alias Alba DNA/RNA-binding protein 0.02 OrthoFinder output from all 47 species
Adi_g080249 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16021 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00666 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012954 No alias R-loop reader protein *(ALBA1/2) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g05649 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.54 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cre09.g401600 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g01943 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017289001 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01035831001 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_144319g0010 No alias R-loop reader protein (ALBA1/2) 0.04 OrthoFinder output from all 47 species
MA_147960g0010 No alias R-loop reader protein (ALBA1/2) 0.04 OrthoFinder output from all 47 species
Mp6g20280.1 No alias R-loop reader protein (ALBA1/2) 0.02 OrthoFinder output from all 47 species
Msp_g00164 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31800 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64773 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09152 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45298 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024990_P001 Zm00001e024990 R-loop reader protein (ALBA1/2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031082 BLOC complex IEP HCCA
CC GO:0031083 BLOC-1 complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 50 103
No external refs found!