Adi_g044665

Description : component *(uL29m) of large mitoribosomal-subunit proteome & original description: none

Gene families : OG0005790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005790_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g044665

Target	Alias	Description	ECC score	Gene Family Method
AT1G07830	No alias	ribosomal protein L29 family protein	0.02	OrthoFinder output from all 47 species
Azfi_s0078.g038228	No alias	component *(uL29m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020684.25	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
LOC_Os06g03790.1	LOC_Os06g03790	component mtRPL29 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Len_g28029	No alias	component *(uL29m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Mp7g13440.1	No alias	component mtRPL29 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000313	organellar ribosome	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005761	mitochondrial ribosome	IEA	Interproscan
CC	GO:0005840	ribosome	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010729	Ribosomal_L47_mit	30	116

External Links

No external refs found!

Adi_g044665

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation