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  5. Ehy_g12123

Ehy_g12123


Description : homologous recombination repair factor *(MDC1) & original description: none


Gene families : OG0002706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002706_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g12123
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT3G21480 No alias BRCT domain-containing DNA repair protein 0.03 OrthoFinder output from all 47 species
Ala_g33126 No alias homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0083.g038772 No alias homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
Cba_g70646 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Dac_g11194 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Dcu_g13615 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Len_g22472 No alias homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
Lfl_g13951 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Ppi_g42098 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!