Solyc12g006280.2.1 (Solyc12g006280.2)


Aliases : Solyc12g006280.2

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP myb-like HTH transcriptional regulator family protein


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g006280.2.1
Cluster HCCA cluster: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 Gene family
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 Gene family
AT3G04030 No alias Homeodomain-like superfamily protein 0.03 Gene family
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.02 Gene family
GSVIVT01000606001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
GSVIVT01020827001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
GSVIVT01021225001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os02g07170 Os02g0168200 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
LOC_Os02g47190 Os02g0700300 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
LOC_Os03g21240 Os03g0329900 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
LOC_Os06g35140 Os06g0543200 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
LOC_Os11g01480 Os11g0106100 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os12g01490 Os12g0105600 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_138039g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_52379g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_8183372g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_937875g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Smo423935 PACid_15403043 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc03g006150.2.1 Solyc03g006150.2 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Solyc10g083340.2.1 Solyc10g083340.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d015407 GRMZM2G052544 No description available 0.02 Gene family
Zm00001d016175 GRMZM2G477238 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Zm00001d026542 GRMZM2G124495 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Zm00001d046981 GRMZM2G454449 27.3.25 RNA.regulation of transcription.MYB domain... 0.06 Gene family
Zm00001d051527 GRMZM2G070865 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 32 82
No external refs found!