Aliases : ATEXP14, EXPA14, ATEXPA14, ATHEXP ALPHA 1.5, EXP14
Description : alpha-class expansin & original description: none
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g042236 | |
Cluster | HCCA: Cluster_289 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g37023 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g32589 | ATHEXP BETA 1.4,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g13173 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g20979 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g41940 | ATEXP14, EXPA14,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene52603.t1 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G048600.1 | EXP15, ATEXPA15,... | alpha-class expansin & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g19493 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g25635 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03349 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_07423 | No alias | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g06010.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g06020.1 | LOC_Os03g06020 | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g15840.1 | LOC_Os04g15840 | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g19600.1 | LOC_Os05g19600 | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g40700.1 | ATHEXP BETA 1.4,... | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Len_g22081 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g29406 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_41212g0010 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Mp2g18610.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Mp8g18860.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g19759 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g24739 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g30056 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g30057 | ATEXPA3, EXP3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g009021 | ATHEXP ALPHA... | not classified & original description: CDS=1-1083 | 0.02 | OrthoFinder output from all 47 species | |
Spa_g17657 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g37473 | EXPA8, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g40846 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000429_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e002274_P001 | ATHEXP BETA 1.4,... | Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 343.0) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014220_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014231_P001 | ATEXPA10,... | Expansin-A13 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e017334_P001 | ATEXPA10,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
No external refs found! |