Adi_g041472

Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g041472

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00214810	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00088770	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
AT3G49910	No alias	Translation protein SH3-like family protein	0.08	OrthoFinder output from all 47 species
AT5G67510	No alias	Translation protein SH3-like family protein	0.06	OrthoFinder output from all 47 species
Ala_g15510	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g33821	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ala_g37339	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Als_g24670	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g58453	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g02606	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g68629	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cba_g06689	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g20992	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cba_g70452	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ceric.06G075600.1	Ceric.06G075600	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.25G058400.1	Ceric.25G058400	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ceric.25G058700.1	Ceric.25G058700	component *(uL24) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.60	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder output from all 47 species
Cre01.g040000	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
Dac_g26116	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Dac_g26942	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dac_g27086	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g24782	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g27600	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dde_g18149	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01000114001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Gb_06102	No alias	component RPL26 of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os11g05370.1	LOC_Os11g05370	component RPL26 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os12g05430.1	LOC_Os12g05430	component RPL26 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Len_g44310	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Lfl_g05207	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Lfl_g06903	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Lfl_g28317	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g36187	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_13141g0010	No alias	component RPL26 of LSU proteome component	0.06	OrthoFinder output from all 47 species
MA_158811g0010	No alias	component RPL26 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp2g12870.1	No alias	component RPL26 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Msp_g37577	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ore_g08094	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ore_g08095	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Pir_g00125	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g06360	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c14_25170V3.1	Pp3c14_25170	Translation protein SH3-like family protein	0.06	OrthoFinder output from all 47 species
Pp3c1_25000V3.1	Pp3c1_25000	Translation protein SH3-like family protein	0.03	OrthoFinder output from all 47 species
Pp3c2_15910V3.1	Pp3c2_15910	Translation protein SH3-like family protein	0.02	OrthoFinder output from all 47 species
Ppi_g27585	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g33996	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g40592	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001854	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g05724	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g06258	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g12169	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g25824	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Smo227399	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
Solyc02g064670.1.1	Solyc02g064670	component RPL26 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc02g092430.1.1	Solyc02g092430	component RPL26 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc03g044000.1.1	Solyc03g044000	component RPL26 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Spa_g06853	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g54872	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Tin_g16183	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e004042_P001	Zm00001e004042	component RPL26 of LSU proteome component	0.01	OrthoFinder output from all 47 species
Zm00001e016957_P001	Zm00001e016957	component RPL26 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e025774_P001	Zm00001e025774	component RPL26 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005787	signal peptidase complex	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005824	KOW	51	82
IPR005756	Ribosomal_L26/L24P_euk/arc	8	121

External Links

No external refs found!

Adi_g041472

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation