Ehy_g11872

Description : component *(bS20c) of small plastid ribosomal-subunit proteome & original description: none

Gene families : OG0006775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006775_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g11872

Target	Alias	Description	ECC score	Gene Family Method
AT3G15190	No alias	chloroplast 30S ribosomal protein S20, putative	0.07	OrthoFinder output from all 47 species
Adi_g045230	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aev_g22835	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Ala_g08893	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Als_g08208	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aob_g06235	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aop_g03027	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Azfi_s0228.g059056	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ceric.11G009600.1	Ceric.11G009600	component *(bS20c) of small plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Cre12.g494750	No alias	Protein biosynthesis.organelle translation...	0.11	OrthoFinder output from all 47 species
Dac_g10899	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Dcu_g37258	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
GSVIVT01014290001	No alias	Protein biosynthesis.organelle translation...	0.07	OrthoFinder output from all 47 species
Gb_27504	No alias	component psRPS20 of small ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
LOC_Os01g48690.1	LOC_Os01g48690	component psRPS20 of small ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
Len_g00203	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Lfl_g00868	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Mp7g14740.1	No alias	component psRPS20 of small ribosomal subunit proteome	0.1	OrthoFinder output from all 47 species
Nbi_g03416	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ore_g04849	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Pir_g10569	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ppi_g26924	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009139	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g20147	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Solyc07g062870.3.1	Solyc07g062870	component psRPS20 of small ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
Spa_g08226	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Spa_g08227	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Spa_g50703	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Tin_g10912	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e028066_P001	Zm00001e028066	component psRPS20 of small ribosomal subunit proteome	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002583	Ribosomal_S20	64	150

External Links

No external refs found!

Ehy_g11872

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation