Solyc11g069500.2.1 (Solyc11g069500.2)


Aliases : Solyc11g069500.2

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Involved in root cap cell differentiation. auxin response factor 10 (ARF10)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g069500.2.1
Cluster HCCA cluster: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019566001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os04g56850 Os04g0664400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os06g46410 Os06g0677800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
LOC_Os08g40900 Os08g0520500,... 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_10432580g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
MA_40335g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_85955g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Smo181406 PACid_15416095 No description available 0.01 Gene family
Solyc00g188857.1.1 Solyc00g188857.1 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.07 Gene family
Solyc03g031970.3.1 Solyc03g031970.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
Solyc05g047460.3.1 Solyc05g047460.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc07g016180.3.1 Solyc07g016180.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d025871 GRMZM2G005284 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d026540 GRMZM2G086949 No description available 0.03 Gene family
Zm00001d026590 GRMZM2G475882 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 273 356
IPR003340 B3_DNA-bd 113 214
No external refs found!