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  5. Adi_g025576

Adi_g025576


Description : not classified & original description: none


Gene families : OG0001817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g025576
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00125910 EMB2001,... GTP-binding protein At2g22870 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G22870 EMB2001 P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024622 No alias not classified & original description: CDS=107-850 0.03 OrthoFinder output from all 47 species
Dac_g00541 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09689 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19744 EMB2001 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04362 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002422 EMB2001 not classified & original description: CDS=79-1041 0.02 OrthoFinder output from all 47 species
Sam_g11076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g008730.3.1 EMB2001, Solyc09g008730 GTP-binding protein At2g22870 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e038655_P001 EMB2001, Zm00001e038655 GTP-binding protein At2g22870 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 153 270
No external refs found!