Aliases : AtRABA5a, RABA5a
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00130p00044920 | ATHSGBP, RABA1d,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0158.g053866 | ATRABA2A,... | A-class RAB GTPase & original description: CDS=282-950 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g00782 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03218 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02106 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05212 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g15033 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g17396 | No alias | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g17397 | No alias | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026535_P001 | AtRABA1f,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005759 | mitochondrial matrix | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043233 | organelle lumen | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 15 | 176 |
No external refs found! |