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  5. Adi_g025017

Adi_g025017 (CDC73, PHP)


Aliases : CDC73, PHP

Description : component *(CDC73/PHP) of PAF1C transcription initiation and elongation complex & original description: none


Gene families : OG0005658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g025017

Target Alias Description ECC score Gene Family Method Actions
Aob_g09984 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Cre02.g104550 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Ehy_g03754 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
GSVIVT01018007001 CDC73, PHP RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
LOC_Os03g46190.1 CDC73, PHP,... component CDC73/PHP of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Lfl_g04658 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Mp1g17000.1 CDC73, PHP component CDC73/PHP of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Ppi_g03750 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR031336 CDC73_C 288 439
IPR032041 Cdc73_N 2 105
No external refs found!