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  5. Adi_g024760

Adi_g024760


Description : assembly factor (eIF1A) of eIF1 & original description: none


Gene families : OG0002330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g024760

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00147020 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
AT5G35680 No alias Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from all 47 species
Ala_g13120 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0036.g025777 No alias assembly factor (eIF1A) of eIF1 & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Cba_g10969 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42374 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00115 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05167 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30569 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
MA_12854g0010 No alias assembly factor (eIF1A) of eIF1 0.02 OrthoFinder output from all 47 species
MA_462542g0010 No alias assembly factor (eIF1A) of eIF1 0.01 OrthoFinder output from all 47 species
Mp4g04190.1 No alias assembly factor (eIF1A) of eIF1 0.01 OrthoFinder output from all 47 species
Msp_g10688 No alias assembly factor (eIF1A) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 74 135
No external refs found!