Solyc11g010270.2.1 (Solyc11g010270.2)


Aliases : Solyc11g010270.2

Description : No description available


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g010270.2.1
Cluster HCCA cluster: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.02 Gene family
AT5G03790 HB51, ATHB51, LMI1 homeobox 51 0.03 Gene family
AT5G65310 ATHB5, ATHB-5, HB5 homeobox protein 5 0.03 Gene family
GSVIVT01003431001 No alias No description available 0.04 Gene family
GSVIVT01009083001 No alias No description available 0.03 Gene family
Zm00001d020804 GRMZM2G056600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d025964 GRMZM2G396527 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d048227 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 57 110
IPR003106 Leu_zip_homeo 112 152
No external refs found!