Adi_g021271 (AtRABG3d, RABG3d)

Aliases : AtRABG3d, RABG3d

Description : G-class RAB GTPase & original description: none

Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g021271

Target	Alias	Description	ECC score	Gene Family Method
Aop_g09532	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.03G072800.1	AtRABG3d,...	G-class RAB GTPase & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01031953001	ATRAB7B, RAB7B,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011168	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: CDS=38-799	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0287.g027148	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: CDS=209-802	0.02	OrthoFinder output from all 47 species
Spa_g12567	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g00266	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e027406_P001	ATRAB7B, RAB7B,...	G-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e028178_P003	ATRABG3B,...	G-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e032146_P002	ATRAB7B, RAB7B,...	G-class RAB GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	57	177
IPR001806	Small_GTPase	2	37

External Links

No external refs found!