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Aliases : PRP39
Description : pre-mRNA-processing protein *(PRP39) & original description: none
Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g09806 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00179p00033790 | AT PRP39-2,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018948 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087387 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16599 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37742 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25483 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G096600.1 | PRP39, Ceric.04G096600 | pre-mRNA-processing protein *(PRP39) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020911.47 | PRP39 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g15145 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g11777 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028421001 | PRP39 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g11200.1 | PRP39, LOC_Os03g11200 | pre-mRNA-processing protein (PRP39) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23571 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g19659 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38712 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42142 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g071240.3.1 | AT PRP39-2,... | pre-mRNA-processing protein (PRP39) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38613 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56288 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |