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Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00116980 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 62 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Als_g10797 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16070 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene41677.t1 | Aspi01Gene41677 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48176.t1 | Aspi01Gene48176 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0019.g015005 | No alias | E3 ubiquitin ligase & original description: CDS=415-1941 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0141.g051337 | No alias | E3 ubiquitin ligase & original description: CDS=102-1823 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0350.g066547 | No alias | E3 ubiquitin ligase & original description: CDS=532-2124 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05312 | No alias | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g01700 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47007 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01655 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032672001 | No alias | U-box domain-containing protein 62 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_03616 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18974 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g08800.1 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g14730.1 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44015 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09636 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10038 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g32791 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14308 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016014 | No alias | E3 ubiquitin ligase & original description: CDS=1-342 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0183.g024927 | No alias | E3 ubiquitin ligase & original description: CDS=350-1696 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12559 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24331 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g052220.3.1 | Solyc05g052220 | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16841 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50858 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03443 | No alias | E3 ubiquiTin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| BP | GO:0000387 | spliceosomal snRNP assembly | IEP | HCCA |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | HCCA |
| MF | GO:0042802 | identical protein binding | IEP | HCCA |
| MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| MF | GO:0060590 | ATPase regulator activity | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |