Adi_g018831 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2

Description : component *(NRPE2) of RNA polymerase V complex & original description: none


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g018831

Target Alias Description ECC score Gene Family Method Actions
Ala_g02637 DRD2, NRPE2,... component *(NRPE2) of RNA polymerase V complex &... 0.03 OrthoFinder output from all 47 species
Ceric.05G021300.1 EMB1989, RPB2,... component *(NRPB2) of RNA polymerase II complex &... 0.02 OrthoFinder output from all 47 species
MA_10429035g0030 EMB1989, RPB2, NRPB2 DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10432131g0010 EMB1989, RPB2, NRPB2 DNA-directed RNA polymerase II subunit RPB2 OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_81144g0010 EMB1989, RPB2, NRPB2 DNA-directed RNA polymerases IV and V subunit 2... 0.02 OrthoFinder output from all 47 species
Solyc02g078260.3.1 EMB1989, RPB2,... subunit 2 of Pol II RNA polymerase 0.02 OrthoFinder output from all 47 species
Solyc03g110880.4.1 DRD2, NRPE2,... subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... 0.03 OrthoFinder output from all 47 species
Spa_g04426 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR007644 RNA_pol_bsu_protrusion 52 467
IPR007642 RNA_pol_Rpb2_2 289 420
IPR007645 RNA_pol_Rpb2_3 497 559
IPR007120 DNA-dir_RNAP_su2_dom 725 1085
IPR007647 RNA_pol_Rpb2_5 675 717
IPR007646 RNA_pol_Rpb2_4 594 657
IPR007641 RNA_pol_Rpb2_7 1087 1178
No external refs found!