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  5. Solyc11g005290.2.1

Solyc11g005290.2.1 (Solyc11g005290.2)


Aliases : Solyc11g005290.2

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g005290.2.1
Cluster HCCA cluster: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT2G42360 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G17905 ATL4H RING/U-box superfamily protein 0.02 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G43420 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01009098001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01018343001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01019530001 No alias 35.2 not assigned.unknown RING/U-box superfamily protein 0.02 Gene family
GSVIVT01026978001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01036593001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01037651001 No alias 35.1 not assigned.no ontology RING/U-box superfamily protein 0.04 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.01 Gene family
LOC_Os02g35329 Os02g0559800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
LOC_Os02g35440 Os02g0561900 No description available 0.02 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g43120 Os02g0645000 No description available 0.01 Gene family
LOC_Os05g39260 Os05g0468900 No description available 0.03 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.02 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.01 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.02 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os11g47690 Os11g0703200 No description available 0.02 Gene family
MA_10106144g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_101154g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10244600g0010 No alias No description available 0.02 Gene family
MA_10260361g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10426834g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_10429091g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_125507g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_159453g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_17390g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_181940g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_214717g0010 No alias No description available 0.03 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_280399g0010 No alias No description available 0.03 Gene family
MA_308999g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_373963g0010 No alias No description available 0.02 Gene family
MA_38690g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_391931g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_43543g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_552961g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.11 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_9521306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc01g098725.1.1 Solyc01g098725.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.04 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.04 Gene family
Solyc05g055390.3.1 Solyc05g055390.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc12g087860.2.1 Solyc12g087860.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d009106 GRMZM2G004519 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d016139 GRMZM2G098925 No description available 0.05 Gene family
Zm00001d027983 GRMZM2G148706 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.07 Gene family
Zm00001d031100 No alias No description available 0.02 Gene family
Zm00001d031880 No alias No description available 0.01 Gene family
Zm00001d034369 GRMZM2G135011 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d037095 GRMZM2G416750 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d046147 No alias No description available 0.02 Gene family
Zm00001d050514 GRMZM2G068239 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d050840 GRMZM2G041344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d052189 GRMZM2G035704 No description available 0.03 Gene family
Zm00001d052342 GRMZM2G033086 No description available 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 738 781
IPR001841 Znf_RING 119 162
IPR001841 Znf_RING 537 580
IPR001841 Znf_RING 327 370
No external refs found!