Solyc10g086580.2.1 (Solyc10g086580.2)


Aliases : Solyc10g086580.2

Description : 1.3.13 PS.calvin cycle.rubisco interacting Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. rubisco activase (RCA)


Gene families : OG_01_0003642 (Gene family) Phylogenetic Tree(s): OG0003642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g086580.2.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT2G39730 RCA rubisco activase 0.25 Gene family
Cpa|evm.model.tig00020848.91 No alias 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.04 Gene family
Cre04.g229300 No alias 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.08 Gene family
GSVIVT01024910001 No alias 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.11 Gene family
GSVIVT01034123001 No alias 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.1 Gene family
LOC_Os11g47970 Os11g0707000 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.12 Gene family
MA_10433855g0010 No alias 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.1 Gene family
Smo268623 PACid_15415708 No description available 0.1 Gene family
Zm00001d048593 GRMZM2G162200 1.3.13 PS.calvin cycle.rubisco interacting Rubisco... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 162 303
No external refs found!