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  5. Adi_g017406

Adi_g017406 (HY3, OOP1, PHYB)


Aliases : HY3, OOP1, PHYB

Description : phytochrome photoreceptor *(PHY) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017406

Target Alias Description ECC score Gene Family Method Actions
Aev_g04889 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G009100.1 HY3, OOP1, PHYB,... temperature sensor protein *(PHY-B) & original... 0.02 OrthoFinder output from all 47 species
Dac_g27827 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031354001 FHY2, HY8, PHYA, FRE1 External stimuli response.light.red/far red light.PHY... 0.01 OrthoFinder output from all 47 species
Len_g17790 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05337 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021936 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original... 0.03 OrthoFinder output from all 47 species
Spa_g14459 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g47597 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013515 Phytochrome_cen-reg 401 574
IPR013654 PAS_2 61 177
IPR003594 HATPase_C 988 1099
IPR013767 PAS_fold 737 859
IPR013767 PAS_fold 606 721
IPR003018 GAF 211 388
No external refs found!