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  5. Adi_g016377

Adi_g016377


Description : mRNA decay factor *(PAT1) & original description: none


Gene families : OG0002686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g016377

Target Alias Description ECC score Gene Family Method Actions
AT1G79090 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Ceric.32G051000.1 Ceric.32G051000 mRNA decay factor *(PAT1) & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g278203 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01020437001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_01548 No alias mRNA decay factor (PAT1) 0.02 OrthoFinder output from all 47 species
MA_10426858g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g05895 No alias mRNA decay factor *(PAT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13550 No alias mRNA decay factor *(PAT1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g017260.2.1 Solyc12g017260 mRNA decay factor (PAT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003876 AMP deaminase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!