Description : cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7) & original description: none
Gene families : OG0006155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006155_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g015526 | |
Cluster | HCCA: Cluster_260 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s0048.g030444 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g11241 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... | 0.02 | OrthoFinder output from all 47 species | |
Mp5g19300.1 | No alias | TAC7 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g30385 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c22_3530V3.1 | Pp3c22_3530 | plastid transcriptionally active7 | 0.01 | OrthoFinder output from all 47 species | |
Solyc03g082970.4.1 | PDE225, PTAC7,... | TAC7 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028140_P001 | PDE225, PTAC7,... | TAC7 cofactor of plastid-encoded RNA polymerase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005985 | sucrose metabolic process | IEP | HCCA |
BP | GO:0005986 | sucrose biosynthetic process | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006378 | mRNA polyadenylation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
MF | GO:0019203 | carbohydrate phosphatase activity | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
BP | GO:0032954 | regulation of cytokinetic process | IEP | HCCA |
BP | GO:0032955 | regulation of division septum assembly | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
MF | GO:0050307 | sucrose-phosphate phosphatase activity | IEP | HCCA |
MF | GO:0050308 | sugar-phosphatase activity | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051301 | cell division | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
BP | GO:1901891 | regulation of cell septum assembly | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |