1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g014576

Adi_g014576


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g014576

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00136100 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g06086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0410.g068508 No alias not classified & original description: CDS=242-1558 0.03 OrthoFinder output from all 47 species
Cre17.g741850 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g15742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22631 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g06242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10520g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g08570.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g12793 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g16710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g038816.1.1 Solyc02g038816 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 73
IPR000504 RRM_dom 128 195
No external refs found!