Adi_g014199 (GCT)


Aliases : GCT

Description : component *(MED13) of kinase module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0005581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005581_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g014199

Target Alias Description ECC score Gene Family Method Actions
Ala_g37172 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Dcu_g04156 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ehy_g17091 GCT component *(MED13) of kinase module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Gb_30550 GCT component MED13 of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37500.1 GCT, LOC_Os05g37500 component MED13 of kinase module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Mp1g01940.1 GCT component MED13 of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Nbi_g38836 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ore_g36609 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Smo447924 GCT RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e036721_P002 GCT, Zm00001e036721 component MED13 of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA Interproscan
BP GO:0006357 regulation of transcription by RNA polymerase II IEA Interproscan
CC GO:0016592 mediator complex IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021643 Mediator_Med13_N 2 233
IPR041285 MID_MedPIWI 1285 1401
IPR041285 MID_MedPIWI 1167 1274
IPR009401 Med13_C 1550 1975
No external refs found!