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  5. Ehy_g09142

Ehy_g09142


Description : regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway & original description: none


Gene families : OG0001980 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g09142

Target Alias Description ECC score Gene Family Method Actions
Ceric.02G070800.1 Ceric.02G070800 regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 398 501
IPR011545 DEAD/DEAH_box_helicase_dom 185 356
IPR025313 DUF4217 543 603
No external refs found!