Solyc10g080660.2.1 (Solyc10g080660.2)


Aliases : Solyc10g080660.2

Description : 29.2.3 protein.synthesis.initiation novel cap-binding protein (NCBP)


Gene families : OG_01_0006356 (Gene family) Phylogenetic Tree(s): OG0006356_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g080660.2.1
Cluster HCCA cluster: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AT5G18110 NCBP novel cap-binding protein 0.02 Gene family
GSVIVT01033412001 No alias 29.2.3 protein.synthesis.initiation novel cap-binding... 0.02 Gene family
LOC_Os03g15590 Os03g0262400 29.2.3 protein.synthesis.initiation novel cap-binding... 0.03 Gene family
Zm00001d028515 GRMZM2G048703 29.2.3 protein.synthesis.initiation novel cap-binding... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
MF GO:0003743 translation initiation factor activity IEA InterProScan
CC GO:0005737 cytoplasm IEA InterProScan
BP GO:0006413 translational initiation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 53 209
No external refs found!