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  5. Ehy_g09039

Ehy_g09039


Description : BBX class-III transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g09039

Target Alias Description ECC score Gene Family Method Actions
Aev_g24424 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04399 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g034007 No alias CMF transcription factor & original description: CDS=693-2417 0.02 OrthoFinder output from all 47 species
Dcu_g20961 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_470965g0010 No alias transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Ppi_g17788 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007602 No alias not classified & original description: CDS=193-1710 0.04 OrthoFinder output from all 47 species
Solyc03g119540.3.1 Solyc03g119540 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Solyc04g007210.3.1 Solyc04g007210 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 453 495
IPR000315 Znf_B-box 30 73
No external refs found!