1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g012843

Adi_g012843 (Tudor1, AtTudor1, TSN1)


Aliases : Tudor1, AtTudor1, TSN1

Description : mRNA endoribonuclease *(TSN) & original description: none


Gene families : OG0004117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004117_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g012843

Target Alias Description ECC score Gene Family Method Actions
Ala_g08386 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18577 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118010.4.1 Tudor1,... ribonuclease (TSN) 0.02 OrthoFinder output from all 47 species
Zm00001e014670_P001 Tudor1,... ribonuclease (TSN) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 35 143
IPR016071 Staphylococal_nuclease_OB-fold 614 712
IPR016071 Staphylococal_nuclease_OB-fold 268 360
IPR016071 Staphylococal_nuclease_OB-fold 856 965
IPR002999 Tudor 736 855
No external refs found!