1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g009972

Adi_g009972 (HYP1, ATHYP1)


Aliases : HYP1, ATHYP1

Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g009972

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00254340 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00185310 evm_27.TU.AmTr_v1... CSC1-like protein At3g21620 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
Ceric.16G055700.1 Ceric.16G055700 calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z101700.1 Ceric.1Z101700 not classified & original description: pacid=50565775... 0.01 OrthoFinder output from all 47 species
Ceric.24G034200.1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Nbi_g08382 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20127 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 364 629
IPR027815 CSC1/OSCA1-like_cyt 194 351
IPR032880 Csc1/OSCA1-like_N 10 171
No external refs found!