Adi_g008942

Description : not classified & original description: none

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g008942

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00080200	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
AMTR_s00062p00185880	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Adi_g013083	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10775	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03270	No alias	chaperone *(Hsp60) & original description: none	0.08	OrthoFinder output from all 47 species
Ceric.10G077900.1	CH-CPN60A,...	chaperone *(Hsp60) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.34G041900.1	CPN60B, LEN1,...	chaperone *(Hsp60) & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020943.69	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha,...	0.02	OrthoFinder output from all 47 species
Cre04.g231222	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Cre07.g339150	No alias	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Dde_g26759	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01031526001	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
LOC_Os12g17910.1	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
MA_10436772g0010	CH-CPN60A, CPN60A, SLP	chaperone (Hsp60)	0.02	OrthoFinder output from all 47 species
MA_587689g0010	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha...	0.02	OrthoFinder output from all 47 species
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Msp_g15426	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g06704	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g09631	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024885	CPN60B, LEN1	chaperone *(Hsp60) & original description: CDS=136-1980	0.02	OrthoFinder output from all 47 species
Sam_g15739	No alias	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g09931	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g06882	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001025_P002	Zm00001e001025	subunit beta of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Zm00001e006438_P001	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Zm00001e025409_P001	Zm00001e025409	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	2	86

External Links

No external refs found!

Adi_g008942

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation