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  5. Ehy_g08609

Ehy_g08609


Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g08609

Target Alias Description ECC score Gene Family Method Actions
Adi_g020775 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g038163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054844 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Azfi_s0203.g057679 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Azfi_s0524.g075292 ATSZF1, SZF1 regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ceric.23G038000.1 ATTZF1, ATCTH,... regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Dde_g04448 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ehy_g08570 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
GSVIVT01015265001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Lfl_g02270 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
MA_98656g0010 No alias mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Msp_g10175 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g02564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10785 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sam_g05121 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g11204 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Tin_g34269 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Zm00001e027566_P001 Zm00001e027566 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 60 136
IPR000571 Znf_CCCH 292 312
No external refs found!