Ehy_g08602 (HSS, ARF1-BP, ARF2, ORE14)

Aliases : HSS, ARF1-BP, ARF2, ORE14

Description : ARF-type transcription factor & original description: none

Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g08602
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00198750	ARF19, IAA22,...	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
AT5G20730	TIR5, MSG1,...	Transcriptional factor B3 family protein /...	0.02	OrthoFinder output from all 47 species
Adi_g110090	ARF1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06732	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g33091	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g49574	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02260	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g07961	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g22072	ARF16	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08752	ARF16	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035933	ARF6	not classified & original description: CDS=1-678	0.01	OrthoFinder output from all 47 species
Cba_g19294	ARF16	ARF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.03G061000.1	HSS, ARF1-BP,...	ARF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g23659	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g36299	ARF6	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g46643	HSS, ARF1-BP, ARF2, ORE14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008639001	HSS, ARF1-BP, ARF2, ORE14	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
GSVIVT01015035001	ARF19, IAA22, ARF11	RNA biosynthesis.transcriptional activation.B3...	0.01	OrthoFinder output from all 47 species
GSVIVT01023149001	ARF1	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
GSVIVT01032251001	ARF19, IAA22, ARF11	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
Gb_23186	HSS, ARF1-BP, ARF2, ORE14	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g43920.1	ARF3, ETT, LOC_Os05g43920	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
Lfl_g07404	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g18657	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Mp4g11820.1	HSS, ARF1-BP, ARF2, ORE14	transcription factor (ARF)	0.01	OrthoFinder output from all 47 species
Ore_g08684	ARF6	ARF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g10460	ARF6	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19283	ARF4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15721	ARF1	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013444	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016361	ARF16	ARF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Sam_g12046	No alias	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16843	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo117217	ARF6	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
Zm00001e003591_P003	ARF19, IAA22,...	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e041866_P001	MP, IAA24, ARF5,...	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	127	228
IPR010525	ARF_dom	253	333
IPR033389	AUX/IAA_dom	697	800

External Links

No external refs found!

Ehy_g08602 (HSS, ARF1-BP, ARF2, ORE14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation